Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 Gm18730-201ENSMUST00000218038 343 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.84□□□□□ -0.51
PdgfrbP05622 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PdgfrbP05622 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Gm8872-201ENSMUST00000197475 1341 ntBASIC11.84□□□□□ -0.51
PdgfrbP05622 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
PdgfrbP05622 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PdgfrbP05622 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PdgfrbP05622 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.83□□□□□ -0.52
PdgfrbP05622 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Gm14277-201ENSMUST00000121195 360 ntBASIC11.83□□□□□ -0.52
PdgfrbP05622 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.83□□□□□ -0.52
PdgfrbP05622 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Rps4l-202ENSMUST00000204242 789 ntBASIC11.83□□□□□ -0.52
PdgfrbP05622 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PdgfrbP05622 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.83□□□□□ -0.52
PdgfrbP05622 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PdgfrbP05622 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdgfrbP05622 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gm27341-201ENSMUST00000183570 106 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.82□□□□□ -0.52
PdgfrbP05622 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Erich3-203ENSMUST00000189969 3460 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdgfrbP05622 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.82□□□□□ -0.52
PdgfrbP05622 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms