Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P01852 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01852 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P01852 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
P01852 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
P01852 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P01852 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P01852 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.68□□□□□ -0.7
P01852 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.68□□□□□ -0.7
P01852 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P01852 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
P01852 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
P01852 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Gm7851-201ENSMUST00000117574 323 ntBASIC10.68□□□□□ -0.7
P01852 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Gm14441-201ENSMUST00000121960 540 ntBASIC10.68□□□□□ -0.7
P01852 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Mir5132-201ENSMUST00000175166 71 ntBASIC10.68□□□□□ -0.7
P01852 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P01852 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.68□□□□□ -0.7
P01852 Gm9136-201ENSMUST00000193368 454 ntBASIC10.68□□□□□ -0.7
P01852 Gm43138-201ENSMUST00000199123 708 ntBASIC10.68□□□□□ -0.7
P01852 Gm43378-201ENSMUST00000199336 582 ntBASIC10.68□□□□□ -0.7
P01852 Gm6905-201ENSMUST00000205729 511 ntBASIC10.68□□□□□ -0.7
P01852 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
P01852 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 BC043934-202ENSMUST00000185694 2356 ntBASIC10.68□□□□□ -0.7
P01852 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
P01852 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.68□□□□□ -0.7
P01852 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
P01852 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P01852 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.68□□□□□ -0.7
P01852 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P01852 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P01852 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.67□□□□□ -0.7
P01852 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P01852 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.67□□□□□ -0.7
P01852 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
P01852 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.67□□□□□ -0.7
P01852 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
P01852 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.67□□□□□ -0.7
P01852 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.67□□□□□ -0.7
P01852 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.67□□□□□ -0.7
P01852 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.67□□□□□ -0.7
P01852 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.67□□□□□ -0.7
P01852 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.67□□□□□ -0.7
P01852 Gm5733-201ENSMUST00000190232 939 ntBASIC10.67□□□□□ -0.7
P01852 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.67□□□□□ -0.7
P01852 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.67□□□□□ -0.7
P01852 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
P01852 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.67□□□□□ -0.7
P01852 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.67□□□□□ -0.7
P01852 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.67□□□□□ -0.7
P01852 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.67□□□□□ -0.7
P01852 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P01852 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms