Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC8.5□□□□□ -1.05
TcraP01849 Gm24644-201ENSMUST00000157114 139 ntBASIC8.5□□□□□ -1.05
TcraP01849 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.5□□□□□ -1.05
TcraP01849 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Gm24196-201ENSMUST00000179161 110 ntBASIC8.5□□□□□ -1.05
TcraP01849 Gm27847-201ENSMUST00000183711 107 ntBASIC8.5□□□□□ -1.05
TcraP01849 Gm27375-201ENSMUST00000183799 107 ntBASIC8.5□□□□□ -1.05
TcraP01849 Gm5896-201ENSMUST00000189662 1024 ntBASIC8.5□□□□□ -1.05
TcraP01849 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
TcraP01849 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
TcraP01849 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 AC125409.1-201ENSMUST00000223213 3370 ntBASIC8.5□□□□□ -1.05
TcraP01849 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
TcraP01849 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TcraP01849 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Gm43447-201ENSMUST00000198471 1535 ntBASIC8.49□□□□□ -1.05
TcraP01849 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC8.49□□□□□ -1.05
TcraP01849 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Erich3-203ENSMUST00000189969 3460 ntBASIC8.49□□□□□ -1.05
TcraP01849 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
TcraP01849 Gm15172-201ENSMUST00000118945 1046 ntBASIC8.49□□□□□ -1.05
TcraP01849 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.49□□□□□ -1.05
TcraP01849 Gm5637-201ENSMUST00000153890 1119 ntBASIC8.49□□□□□ -1.05
TcraP01849 Gm22331-201ENSMUST00000158066 136 ntBASIC8.49□□□□□ -1.05
TcraP01849 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC8.49□□□□□ -1.05
TcraP01849 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
TcraP01849 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Gm9136-201ENSMUST00000193368 454 ntBASIC8.49□□□□□ -1.05
TcraP01849 Gm37497-201ENSMUST00000195830 798 ntBASIC8.49□□□□□ -1.05
TcraP01849 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
TcraP01849 Gm29705-201ENSMUST00000212598 474 ntBASIC8.49□□□□□ -1.05
TcraP01849 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 AC155237.1-201ENSMUST00000226196 1279 ntBASIC8.49□□□□□ -1.05
TcraP01849 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Gm24526-201ENSMUST00000082921 158 ntBASIC8.49□□□□□ -1.05
TcraP01849 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
TcraP01849 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.49□□□□□ -1.05
TcraP01849 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
TcraP01849 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
TcraP01849 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms