Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Snora73b-201ENSMUST00000083419 205 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.61□□□□□ -0.39
Vti1aO89116 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Vti1aO89116 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm12795-201ENSMUST00000117594 539 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm14247-201ENSMUST00000120950 237 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm8737-201ENSMUST00000122208 642 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.6□□□□□ -0.39
Vti1aO89116 Mir6958-201ENSMUST00000184207 73 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm29499-201ENSMUST00000189151 486 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm28329-201ENSMUST00000191208 689 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm29171-201ENSMUST00000191397 486 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Vti1aO89116 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.6□□□□□ -0.39
Vti1aO89116 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vti1aO89116 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.6□□□□□ -0.39
Vti1aO89116 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Vti1aO89116 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm14193-201ENSMUST00000105067 153 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm15004-201ENSMUST00000119192 630 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm15595-201ENSMUST00000120840 961 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm13182-201ENSMUST00000122241 312 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.59□□□□□ -0.39
Vti1aO89116 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm29155-201ENSMUST00000185910 269 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm38210-201ENSMUST00000191944 809 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm43186-201ENSMUST00000198130 824 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm10752-201ENSMUST00000218348 729 ntBASIC12.59□□□□□ -0.39
Vti1aO89116 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.59□□□□□ -0.39
Vti1aO89116 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vti1aO89116 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms