Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm14193-201ENSMUST00000105067 153 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm9062-201ENSMUST00000117712 727 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm8731-201ENSMUST00000118088 412 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdlim1O70400 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.55□□□□□ -0.56
Pdlim1O70400 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim1O70400 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm15595-201ENSMUST00000120840 961 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm15566-201ENSMUST00000121130 590 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm12566-201ENSMUST00000121479 359 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdlim1O70400 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm10774-201ENSMUST00000188689 204 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm37246-201ENSMUST00000192665 835 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm37835-201ENSMUST00000193305 361 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm43002-201ENSMUST00000200310 155 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Spcs1-203ENSMUST00000226374 592 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm4978-201ENSMUST00000071565 801 ntBASIC11.54□□□□□ -0.56
Pdlim1O70400 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.54□□□□□ -0.56
Pdlim1O70400 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim1O70400 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pdlim1O70400 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdlim1O70400 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms