Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Chrna4O70174 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm14058-201ENSMUST00000116082 735 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Gm13035-201ENSMUST00000117496 342 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm11450-201ENSMUST00000121144 333 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.73□□□□□ -0.53
Chrna4O70174 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chrna4O70174 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.73□□□□□ -0.53
Chrna4O70174 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Chrna4O70174 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chrna4O70174 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Chrna4O70174 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chrna4O70174 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chrna4O70174 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.73□□□□□ -0.53
Chrna4O70174 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chrna4O70174 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Chrna4O70174 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Chrna4O70174 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Gm11500-201ENSMUST00000118237 601 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.72□□□□□ -0.53
Chrna4O70174 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Chrna4O70174 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.72□□□□□ -0.53
Chrna4O70174 Gm25732-201ENSMUST00000175168 60 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.72□□□□□ -0.53
Chrna4O70174 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Chrna4O70174 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chrna4O70174 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.72□□□□□ -0.53
Chrna4O70174 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chrna4O70174 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Chrna4O70174 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chrna4O70174 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Chrna4O70174 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.71□□□□□ -0.53
Chrna4O70174 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.71□□□□□ -0.53
Chrna4O70174 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chrna4O70174 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms