Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm8111-201ENSMUST00000117659 987 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm17192-201ENSMUST00000169031 511 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm4862-201ENSMUST00000170405 438 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm5621-201ENSMUST00000187303 640 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Gm43912-201ENSMUST00000204352 538 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trdmt1O55055 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.81□□□□□ -0.36
Trdmt1O55055 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trdmt1O55055 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trdmt1O55055 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trdmt1O55055 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.8□□□□□ -0.36
Trdmt1O55055 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.8□□□□□ -0.36
Trdmt1O55055 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdmt1O55055 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdmt1O55055 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.79□□□□□ -0.36
Trdmt1O55055 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdmt1O55055 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms