Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.83□□□□□ -0.68
BckdkO55028 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
BckdkO55028 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
BckdkO55028 Gm13035-201ENSMUST00000117496 342 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm11941-201ENSMUST00000119904 610 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.83□□□□□ -0.68
BckdkO55028 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.83□□□□□ -0.68
BckdkO55028 Gm44100-201ENSMUST00000204329 436 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm4157-201ENSMUST00000211647 679 ntBASIC10.83□□□□□ -0.68
BckdkO55028 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
BckdkO55028 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
BckdkO55028 Gm26448-201ENSMUST00000082446 203 ntBASIC10.83□□□□□ -0.68
BckdkO55028 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
BckdkO55028 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
BckdkO55028 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.83□□□□□ -0.68
BckdkO55028 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
BckdkO55028 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
BckdkO55028 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
BckdkO55028 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Gm14058-201ENSMUST00000116082 735 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Gm11511-201ENSMUST00000118146 540 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Gm12196-201ENSMUST00000120954 262 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.82□□□□□ -0.68
BckdkO55028 Gm25881-201ENSMUST00000157783 103 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Rprl1-201ENSMUST00000158050 327 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.82□□□□□ -0.68
BckdkO55028 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
BckdkO55028 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.82□□□□□ -0.68
BckdkO55028 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
BckdkO55028 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
BckdkO55028 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms