Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Gm25857-201ENSMUST00000082788 129 ntBASIC13.81□□□□□ -0.2
Smarce1O54941 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.81□□□□□ -0.2
Smarce1O54941 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Smarce1O54941 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Gm26047-201ENSMUST00000157308 113 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Mir8093-201ENSMUST00000185043 137 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Gm26047-202ENSMUST00000198840 115 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.8□□□□□ -0.2
Smarce1O54941 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.8□□□□□ -0.2
Smarce1O54941 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Smarce1O54941 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.8□□□□□ -0.2
Smarce1O54941 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smarce1O54941 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarce1O54941 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm13296-201ENSMUST00000117854 997 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm4157-201ENSMUST00000211647 679 ntBASIC13.79□□□□□ -0.2
Smarce1O54941 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarce1O54941 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarce1O54941 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarce1O54941 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarce1O54941 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarce1O54941 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms