Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.4□□□□□ -0.74
Alx4O35137 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Gm43433-201ENSMUST00000196573 481 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.4□□□□□ -0.74
Alx4O35137 Gm8712-201ENSMUST00000221090 701 ntBASIC10.4□□□□□ -0.74
Alx4O35137 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.4□□□□□ -0.74
Alx4O35137 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.4□□□□□ -0.74
Alx4O35137 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Alx4O35137 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Alx4O35137 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Alx4O35137 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.4□□□□□ -0.74
Alx4O35137 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Alx4O35137 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Alx4O35137 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Alx4O35137 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Alx4O35137 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Alx4O35137 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Gm26286-201ENSMUST00000104166 134 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.39□□□□□ -0.75
Alx4O35137 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.39□□□□□ -0.75
Alx4O35137 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.39□□□□□ -0.75
Alx4O35137 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Mir8093-201ENSMUST00000185043 137 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.39□□□□□ -0.75
Alx4O35137 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Gm43133-201ENSMUST00000197472 463 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm6450-201ENSMUST00000200896 574 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm19187-201ENSMUST00000206781 892 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Gm19309-201ENSMUST00000218295 205 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm7046-201ENSMUST00000221351 977 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm5455-201ENSMUST00000058710 715 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Alx4O35137 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Alx4O35137 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Alx4O35137 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.39□□□□□ -0.75
Alx4O35137 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Alx4O35137 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms