Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm12986-201ENSMUST00000119037 967 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Gm42751-201ENSMUST00000198065 559 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Polr1aO35134 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC17.62■□□□□ 0.41
Polr1aO35134 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Gm26782-203ENSMUST00000227103 751 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 AC156790.2-201ENSMUST00000227115 568 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Polr1aO35134 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Gm43102-201ENSMUST00000201004 2324 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Gng5-ps-201ENSMUST00000120931 205 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Gm14113-201ENSMUST00000121399 976 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Gm43752-201ENSMUST00000198475 697 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC17.61■□□□□ 0.41
Polr1aO35134 AC164556.1-201ENSMUST00000221318 751 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Gm10020-201ENSMUST00000081993 612 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Polr1aO35134 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Polr1aO35134 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Gm15519-201ENSMUST00000120088 1566 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Polr1aO35134 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC17.61■□□□□ 0.41
Polr1aO35134 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Polr1aO35134 Mir1893-201ENSMUST00000122565 83 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Gm37723-201ENSMUST00000194480 565 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Gm7939-201ENSMUST00000201233 1050 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 BC080696-201ENSMUST00000202858 1218 ntBASIC17.61■□□□□ 0.41
Polr1aO35134 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Polr1aO35134 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Polr1aO35134 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Polr1aO35134 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Polr1aO35134 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Polr1aO35134 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Polr1aO35134 Gm24954-201ENSMUST00000178831 110 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC17.6■□□□□ 0.41
Polr1aO35134 Gm43854-201ENSMUST00000200418 394 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms