Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm6023-201ENSMUST00000118217 606 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm7653-201ENSMUST00000214567 508 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.59□□□□□ -0.71
Shisa8J3QNX5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Shisa8J3QNX5 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm25214-201ENSMUST00000104573 129 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm38158-201ENSMUST00000194617 339 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gm807-202ENSMUST00000224929 408 ntBASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Shisa8J3QNX5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms