Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm30946-201ENSMUST00000198288 724 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm16477-201ENSMUST00000085365 801 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm17415-201ENSMUST00000096427 789 ntBASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm15374-201ENSMUST00000119313 844 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm18733-202ENSMUST00000174447 401 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm6946-201ENSMUST00000182237 987 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm4034-201ENSMUST00000187674 480 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm9701-201ENSMUST00000077976 427 ntBASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc188F6WEU2 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc188F6WEU2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms