Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm39404-201ENSMUST00000216350 313 ntBASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Ccdc71lE9Q4T4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Mir1247-201ENSMUST00000116706 82 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm12490-201ENSMUST00000120255 560 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm12138-201ENSMUST00000122180 951 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm24548-201ENSMUST00000158650 108 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ccdc71lE9Q4T4 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ccdc71lE9Q4T4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms