Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm13171-201ENSMUST00000117233 391 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm13286-201ENSMUST00000117750 537 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm6644-201ENSMUST00000186507 951 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col4a6B1AVK5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm23255-201ENSMUST00000102244 110 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm13827-201ENSMUST00000148801 372 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Snord55-201ENSMUST00000174939 79 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm43547-201ENSMUST00000197729 328 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col4a6B1AVK5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm23769-201ENSMUST00000104441 121 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm4917-201ENSMUST00000121452 650 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm12745-201ENSMUST00000121767 214 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm25872-201ENSMUST00000177784 100 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm6677-201ENSMUST00000195100 441 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm42751-201ENSMUST00000198065 559 ntBASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col4a6B1AVK5 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms