Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm18561-201ENSMUST00000206027 804 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm45594-201ENSMUST00000211717 241 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm9139-201ENSMUST00000218817 700 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm15549-201ENSMUST00000121595 622 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd3B1AR17 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm44329-201ENSMUST00000197469 112 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm45856-201ENSMUST00000212752 416 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Chd3B1AR17 Gm23105-201ENSMUST00000083719 134 ntBASIC11.4□□□□□ -0.58
Chd3B1AR17 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd3B1AR17 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.4□□□□□ -0.59
Chd3B1AR17 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd3B1AR17 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd3B1AR17 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd3B1AR17 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chd3B1AR17 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.39□□□□□ -0.59
Chd3B1AR17 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.39□□□□□ -0.59
Chd3B1AR17 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm14892-201ENSMUST00000117636 267 ntBASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm11340-201ENSMUST00000119226 412 ntBASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.39□□□□□ -0.59
Chd3B1AR17 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chd3B1AR17 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Chd3B1AR17 Gm37299-201ENSMUST00000193951 826 ntBASIC11.39□□□□□ -0.59
Chd3B1AR17 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.39□□□□□ -0.59
Chd3B1AR17 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms