Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm25053-201ENSMUST00000103982 133 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm25922-201ENSMUST00000104281 130 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm12274-201ENSMUST00000120062 385 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm12990-201ENSMUST00000120372 468 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm15197-201ENSMUST00000120526 478 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm24679-201ENSMUST00000158762 111 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm43163-201ENSMUST00000196571 442 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm25053-202ENSMUST00000199731 132 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn3aA2ASI5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn3aA2ASI5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm13600-201ENSMUST00000117949 744 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm7593-201ENSMUST00000187246 644 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm43966-201ENSMUST00000203301 612 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm18463-201ENSMUST00000207258 474 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm18460-201ENSMUST00000208088 464 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn3aA2ASI5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms