Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Mir6392-201ENSMUST00000184924 108 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Mir7023-201ENSMUST00000185093 64 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm37917-201ENSMUST00000194711 392 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 AC153929.1-201ENSMUST00000219009 303 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm7446-201ENSMUST00000221035 1240 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Wdyhv1-203ENSMUST00000226889 394 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm37447-201ENSMUST00000195625 2928 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 AC167022.1-201ENSMUST00000218647 1458 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Gm14608-201ENSMUST00000120030 1553 ntBASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trav8-1A0A075B641 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm44152-201ENSMUST00000205007 1691 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm15172-201ENSMUST00000118945 1046 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm5637-201ENSMUST00000153890 1119 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm26185-201ENSMUST00000157692 266 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm22121-201ENSMUST00000175148 54 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm44855-201ENSMUST00000205725 362 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Cdk7-205ENSMUST00000225990 1159 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm45342-201ENSMUST00000210903 1363 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trav8-1A0A075B641 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms