Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm14585-201ENSMUST00000120713 634 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm42816-201ENSMUST00000198433 325 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm7600-201ENSMUST00000209657 785 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm14892-201ENSMUST00000117636 267 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm44323-201ENSMUST00000198689 129 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Mir1901-201ENSMUST00000122616 78 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gm30946-201ENSMUST00000198288 724 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Rubie-203ENSMUST00000227803 2430 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn8aQ9WTU3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm37826-201ENSMUST00000195329 322 ntBASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.65□□□□□ -0.54
Scn8aQ9WTU3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms