Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ccl28Q9JIL2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ccl28Q9JIL2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ccl28Q9JIL2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ccl28Q9JIL2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm14109-201ENSMUST00000118814 309 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Mir8109-201ENSMUST00000184375 117 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm45598-202ENSMUST00000210719 986 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm5455-201ENSMUST00000058710 715 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gm17383-201ENSMUST00000078739 1041 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl28Q9JIL2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl28Q9JIL2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm11511-201ENSMUST00000118146 540 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl28Q9JIL2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms