Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ube3bQ9ES34 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.9□□□□□ -0.19
Ube3bQ9ES34 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm11667-201ENSMUST00000119828 486 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm7741-201ENSMUST00000181445 989 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm43520-201ENSMUST00000197996 164 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 CT025561.1-201ENSMUST00000214972 674 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Lect2-202ENSMUST00000225183 823 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ube3bQ9ES34 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm6485-201ENSMUST00000160676 439 ntBASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm21147-201ENSMUST00000186046 913 ntBASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm44551-201ENSMUST00000208804 171 ntBASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.88□□□□□ -0.19
Ube3bQ9ES34 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ube3bQ9ES34 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms