Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm25076-201ENSMUST00000104098 132 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm11500-201ENSMUST00000118237 601 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm11244-201ENSMUST00000121243 237 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm10731-201ENSMUST00000181171 448 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm7741-201ENSMUST00000181445 989 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm7504-201ENSMUST00000201449 424 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atp13a1Q9EPE9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Gm16166-201ENSMUST00000118291 787 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Gm5451-201ENSMUST00000080545 579 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atp13a1Q9EPE9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atp13a1Q9EPE9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Atp13a1Q9EPE9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Atp13a1Q9EPE9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm15615-201ENSMUST00000118876 198 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm12208-201ENSMUST00000122004 163 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Mir7076-201ENSMUST00000183519 74 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm8365-201ENSMUST00000197334 648 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm43520-201ENSMUST00000197996 164 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Gm44315-201ENSMUST00000203041 219 ntBASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Atp13a1Q9EPE9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms