Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm8566-201ENSMUST00000120174 465 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Mir5120-201ENSMUST00000175020 78 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm6114-201ENSMUST00000182472 968 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2aQ9DB34 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm13461-201ENSMUST00000120980 662 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm8199-201ENSMUST00000121323 823 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm18827-201ENSMUST00000188341 790 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm2965-201ENSMUST00000198365 343 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm7848-201ENSMUST00000210739 718 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm1821-202ENSMUST00000227415 750 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Erich3-203ENSMUST00000189969 3460 ntBASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp2aQ9DB34 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.15□□□□□ -0.46
Chmp2aQ9DB34 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms