Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm12058-201ENSMUST00000118614 437 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm11591-201ENSMUST00000120063 702 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm16379-201ENSMUST00000161469 348 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Auts2-212ENSMUST00000178555 309 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm8762-201ENSMUST00000193486 339 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gm17931-201ENSMUST00000208132 634 ntBASIC8.84□□□□□ -0.99
Hcfc2Q9D968 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hcfc2Q9D968 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -1
Hcfc2Q9D968 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Hcfc2Q9D968 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Hcfc2Q9D968 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm8706-201ENSMUST00000197372 1491 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm12138-201ENSMUST00000122180 951 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm7809-201ENSMUST00000153199 742 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC8.83□□□□□ -1
Hcfc2Q9D968 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm3890-201ENSMUST00000182416 207 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm42937-201ENSMUST00000197360 752 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.83□□□□□ -1
Hcfc2Q9D968 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hcfc2Q9D968 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hcfc2Q9D968 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms