Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm5356-201ENSMUST00000093326 615 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm12490-201ENSMUST00000120255 560 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm22885-201ENSMUST00000157410 107 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm6244-201ENSMUST00000178732 841 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm39404-201ENSMUST00000216350 313 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim42Q9D2H5 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm24644-201ENSMUST00000157114 139 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm45384-201ENSMUST00000210451 277 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Gm807-202ENSMUST00000224929 408 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim42Q9D2H5 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms