Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm11660-201ENSMUST00000120955 412 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Mospd4-201ENSMUST00000180618 576 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm38158-201ENSMUST00000194617 339 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm5982-201ENSMUST00000196234 512 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm4986-201ENSMUST00000119731 549 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm28937-201ENSMUST00000185413 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm29400-201ENSMUST00000187208 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm28662-201ENSMUST00000188446 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm28251-201ENSMUST00000188835 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm37318-201ENSMUST00000194325 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm38017-201ENSMUST00000194768 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm37287-201ENSMUST00000195449 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm37793-201ENSMUST00000195548 695 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm6450-201ENSMUST00000200896 574 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm19187-201ENSMUST00000206781 892 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gm2553-201ENSMUST00000215986 605 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ssu72Q9CY97 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ssu72Q9CY97 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms