Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm7857-201ENSMUST00000117957 358 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm23085-201ENSMUST00000157849 293 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm16505-201ENSMUST00000179981 232 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm38314-201ENSMUST00000195709 625 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm7940-201ENSMUST00000218195 769 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa3Q9CQ71 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Rpa3Q9CQ71 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa3Q9CQ71 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpa3Q9CQ71 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Rpa3Q9CQ71 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm24891-201ENSMUST00000104391 136 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 AU022133-201ENSMUST00000200601 873 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm45575-201ENSMUST00000210283 548 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Gm19208-201ENSMUST00000213861 912 ntBASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpa3Q9CQ71 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms