Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm9996-201ENSMUST00000070359 913 ntBASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ska1Q9CPV1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm12957-201ENSMUST00000117835 377 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm17931-201ENSMUST00000208132 634 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm6013-201ENSMUST00000212264 699 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ska1Q9CPV1 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.03□□□□□ -0.64
Ska1Q9CPV1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.03□□□□□ -0.64
Ska1Q9CPV1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gm14832-201ENSMUST00000121289 322 ntBASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gm43118-201ENSMUST00000199149 775 ntBASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gm5950-201ENSMUST00000213337 772 ntBASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.03□□□□□ -0.64
Ska1Q9CPV1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms