Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.86□□□□□ -0.51
Trem2Q99NH8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trem2Q99NH8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.86□□□□□ -0.51
Trem2Q99NH8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trem2Q99NH8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm7150-201ENSMUST00000122032 981 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm25881-201ENSMUST00000157783 103 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm8459-201ENSMUST00000162504 760 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm6439-201ENSMUST00000199849 862 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm45186-201ENSMUST00000206874 478 ntBASIC11.85□□□□□ -0.51
Trem2Q99NH8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trem2Q99NH8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gm13263-201ENSMUST00000121271 838 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gm18734-201ENSMUST00000172937 808 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.84□□□□□ -0.51
Trem2Q99NH8 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gm8385-201ENSMUST00000058999 643 ntBASIC11.84□□□□□ -0.51
Trem2Q99NH8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trem2Q99NH8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms