Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm8956-201ENSMUST00000203939 825 ntBASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm19187-201ENSMUST00000206781 892 ntBASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gzmn-202ENSMUST00000225535 989 ntBASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm25857-201ENSMUST00000082788 129 ntBASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkd1Q99MH6 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.97□□□□□ -0.65
Nkd1Q99MH6 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkd1Q99MH6 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkd1Q99MH6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms