Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm8325-201ENSMUST00000099086 453 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.28□□□□□ -0.76
Scrt1Q99M85 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Scrt1Q99M85 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Scrt1Q99M85 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm26013-201ENSMUST00000104404 119 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm23045-201ENSMUST00000175041 96 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm43778-201ENSMUST00000199438 199 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.27□□□□□ -0.77
Scrt1Q99M85 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Scrt1Q99M85 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Scrt1Q99M85 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.26□□□□□ -0.77
Scrt1Q99M85 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms