Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm15198-201ENSMUST00000117283 177 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm14723-201ENSMUST00000118686 215 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cstf3Q99LI7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Cstf3Q99LI7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gm43179-201ENSMUST00000198797 275 ntBASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gm45224-201ENSMUST00000208203 414 ntBASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cstf3Q99LI7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms