Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb18Q91Y02 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm11675-201ENSMUST00000121873 832 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm10731-201ENSMUST00000181171 448 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm37028-201ENSMUST00000194276 107 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb18Q91Y02 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm25076-201ENSMUST00000104098 132 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm26013-201ENSMUST00000104404 119 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm7150-201ENSMUST00000122032 981 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Mir1956-201ENSMUST00000157748 65 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm42657-201ENSMUST00000201746 211 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb18Q91Y02 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms