Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm16479-201ENSMUST00000121706 932 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm37676-201ENSMUST00000195496 507 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm37008-201ENSMUST00000195712 319 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm43179-201ENSMUST00000198797 275 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 AC168059.2-201ENSMUST00000224473 333 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb3Q91XZ7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gm45114-201ENSMUST00000208280 1349 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gm22018-201ENSMUST00000104357 131 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 AC122924.1-201ENSMUST00000222044 163 ntBASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb3Q91XZ7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms