Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm38314-201ENSMUST00000195709 625 ntBASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb5Q91XZ5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm16219-201ENSMUST00000120096 274 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm18065-201ENSMUST00000221395 526 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb5Q91XZ5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm14807-201ENSMUST00000116640 983 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm14071-201ENSMUST00000117817 509 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm6407-201ENSMUST00000176468 549 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm9135-201ENSMUST00000182963 990 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm43163-201ENSMUST00000196571 442 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm3726-201ENSMUST00000203110 785 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm30671-201ENSMUST00000214898 318 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Gm5805-201ENSMUST00000072779 456 ntBASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb5Q91XZ5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.71□□□□□ -0.22
Pcdhb5Q91XZ5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms