Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm8199-201ENSMUST00000121323 823 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm3329-201ENSMUST00000159873 556 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm20495-201ENSMUST00000173902 235 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Gm10288-201ENSMUST00000084614 537 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb6Q91XZ4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm24990-201ENSMUST00000157406 323 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm8459-201ENSMUST00000162504 760 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm27341-201ENSMUST00000183570 106 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb6Q91XZ4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb6Q91XZ4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb6Q91XZ4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms