Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm15374-201ENSMUST00000119313 844 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm22877-201ENSMUST00000175451 105 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm3726-201ENSMUST00000203110 785 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.33□□□□□ -0.28
Trex1Q91XB0 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trex1Q91XB0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm16219-201ENSMUST00000120096 274 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm6407-201ENSMUST00000176468 549 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm23694-201ENSMUST00000179335 110 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm18059-201ENSMUST00000208073 580 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm39288-201ENSMUST00000210554 446 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm5805-201ENSMUST00000072779 456 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.32□□□□□ -0.28
Trex1Q91XB0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex1Q91XB0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm14807-201ENSMUST00000116640 983 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm16380-201ENSMUST00000077997 478 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.31□□□□□ -0.28
Trex1Q91XB0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex1Q91XB0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms