Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm22323-201ENSMUST00000103832 109 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm37259-201ENSMUST00000193903 849 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm17812-201ENSMUST00000204935 318 ntBASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
H1fooQ8VIK3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
H1fooQ8VIK3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm13350-201ENSMUST00000120519 479 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm25668-201ENSMUST00000157700 129 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm17376-201ENSMUST00000166016 84 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm7584-201ENSMUST00000175829 940 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm25890-201ENSMUST00000177643 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm22614-201ENSMUST00000178300 165 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm29615-201ENSMUST00000185371 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28224-201ENSMUST00000186078 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm29001-201ENSMUST00000186177 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28292-201ENSMUST00000186593 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28101-201ENSMUST00000187608 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm29076-201ENSMUST00000187689 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28302-201ENSMUST00000187931 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28646-201ENSMUST00000188220 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28205-201ENSMUST00000189177 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm29032-201ENSMUST00000189797 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm28695-201ENSMUST00000190300 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm37448-201ENSMUST00000192795 697 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Rps4l-202ENSMUST00000204242 789 ntBASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.77□□□□□ -0.85
H1fooQ8VIK3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms