Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm12058-201ENSMUST00000118614 437 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Mir1982-201ENSMUST00000157368 74 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm5370-201ENSMUST00000187187 574 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm37201-201ENSMUST00000191845 523 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh18Q8VHR0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Mir1247-201ENSMUST00000116706 82 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm6023-201ENSMUST00000118217 606 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh18Q8VHR0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh18Q8VHR0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms