Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm20426-201ENSMUST00000173657 440 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm19353-201ENSMUST00000184561 445 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.05□□□□□ -0.48
Rprd1aQ8VDS4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Gm13916-201ENSMUST00000117368 628 ntBASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rprd1aQ8VDS4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms