Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm37542-201ENSMUST00000192563 2832 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm12501-201ENSMUST00000119163 529 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11□□□□□ -0.65
Clrn1Q8K445 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Clrn1Q8K445 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11□□□□□ -0.65
Clrn1Q8K445 Gm17040-202ENSMUST00000170597 889 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Gm42790-201ENSMUST00000201268 969 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11□□□□□ -0.65
Clrn1Q8K445 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11□□□□□ -0.65
Clrn1Q8K445 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Gm5537-201ENSMUST00000091117 1252 ntBASIC11□□□□□ -0.65
Clrn1Q8K445 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11□□□□□ -0.65
Clrn1Q8K445 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Clrn1Q8K445 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clrn1Q8K445 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.99□□□□□ -0.65
Clrn1Q8K445 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm15236-201ENSMUST00000117309 379 ntBASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm27530-201ENSMUST00000184096 98 ntBASIC10.99□□□□□ -0.65
Clrn1Q8K445 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Gm10288-201ENSMUST00000084614 537 ntBASIC10.99□□□□□ -0.65
Clrn1Q8K445 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Clrn1Q8K445 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms