Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Rprl1-201ENSMUST00000158050 327 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Mir1943-201ENSMUST00000158276 73 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm45118-201ENSMUST00000208928 825 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.95□□□□□ -0.5
CopaQ8CIE6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CopaQ8CIE6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
CopaQ8CIE6 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm13035-201ENSMUST00000117496 342 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm13045-201ENSMUST00000119019 712 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm7722-201ENSMUST00000120646 741 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm9211-201ENSMUST00000182882 975 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Mir7677-201ENSMUST00000184226 67 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CopaQ8CIE6 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CopaQ8CIE6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms