Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc28bQ8CEG5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm13875-201ENSMUST00000120162 282 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm25261-201ENSMUST00000157416 134 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Auts2-212ENSMUST00000178555 309 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm38314-201ENSMUST00000195709 625 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm9996-201ENSMUST00000070359 913 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Snora73a-201ENSMUST00000082453 205 ntBASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc28bQ8CEG5 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gm5419-201ENSMUST00000119301 527 ntBASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc28bQ8CEG5 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 193.5 ms