Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.56□□□□□ -0.4
Vcpip1Q8CDG3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm24514-201ENSMUST00000174961 285 ntBASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcpip1Q8CDG3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm22334-201ENSMUST00000158070 133 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 AA914427-201ENSMUST00000193194 1166 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm44651-201ENSMUST00000207343 372 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vcpip1Q8CDG3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcpip1Q8CDG3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms