Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm13888-201ENSMUST00000119148 422 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm43058-201ENSMUST00000197645 625 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm43962-201ENSMUST00000203898 190 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm8285-201ENSMUST00000208293 759 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps53Q8CCB4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm12029-201ENSMUST00000120073 832 ntBASIC13.6□□□□□ -0.23
Vps53Q8CCB4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.6□□□□□ -0.23
Vps53Q8CCB4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm43916-201ENSMUST00000205062 967 ntBASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps53Q8CCB4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm17391-201ENSMUST00000171036 126 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm9136-201ENSMUST00000193368 454 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm4482-201ENSMUST00000200876 742 ntBASIC13.59□□□□□ -0.23
Vps53Q8CCB4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps53Q8CCB4 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms