Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.09□□□□□ -0.63
Eri3Q8C460 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Eri3Q8C460 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Eri3Q8C460 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Eri3Q8C460 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Eri3Q8C460 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Eri3Q8C460 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Eri3Q8C460 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm24891-201ENSMUST00000104391 136 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm11783-201ENSMUST00000119549 885 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm11450-201ENSMUST00000121144 333 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm26047-201ENSMUST00000157308 113 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm18734-201ENSMUST00000172937 808 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm26047-202ENSMUST00000198840 115 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Gm45113-201ENSMUST00000207518 165 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.08□□□□□ -0.64
Eri3Q8C460 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Eri3Q8C460 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Eri3Q8C460 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm13461-201ENSMUST00000120980 662 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm8199-201ENSMUST00000121323 823 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Eri3Q8C460 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Eri3Q8C460 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.07□□□□□ -0.64
Eri3Q8C460 Gm5982-201ENSMUST00000196234 512 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms