Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp47Q8BY87 Gm12218-201ENSMUST00000117666 399 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm37826-201ENSMUST00000195329 322 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm5740-201ENSMUST00000211003 1857 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm8111-201ENSMUST00000117659 987 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm29067-201ENSMUST00000190821 470 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm2875-201ENSMUST00000211333 360 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 CT010506.1-201ENSMUST00000223673 349 ntBASIC16.38■□□□□ 0.21
Usp47Q8BY87 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Usp47Q8BY87 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm42943-201ENSMUST00000199676 3242 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm5171-201ENSMUST00000214944 1415 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Pck2-205ENSMUST00000226352 2784 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm10752-201ENSMUST00000218348 729 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 CT025602.2-201ENSMUST00000226553 772 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Usp47Q8BY87 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp47Q8BY87 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.37■□□□□ 0.21
Usp47Q8BY87 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp47Q8BY87 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Usp47Q8BY87 Gm25766-201ENSMUST00000104101 131 ntBASIC16.36■□□□□ 0.21
Usp47Q8BY87 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms