Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Col16a1Q8BLX7 AC022682.1-201ENSMUST00000224624 2023 ntBASIC15.05■□□□□ 0
Col16a1Q8BLX7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm13171-201ENSMUST00000117233 391 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm14113-201ENSMUST00000121399 976 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm11993-201ENSMUST00000121861 820 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm5529-201ENSMUST00000165691 891 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm9625-201ENSMUST00000180422 955 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm19927-201ENSMUST00000185792 781 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm42660-201ENSMUST00000197733 947 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm42867-201ENSMUST00000202995 469 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm10254-201ENSMUST00000052888 867 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm5513-201ENSMUST00000072982 1218 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm43152-201ENSMUST00000202495 1638 ntBASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col16a1Q8BLX7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm42970-201ENSMUST00000196407 1352 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm16165-201ENSMUST00000160140 795 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm37207-201ENSMUST00000194284 296 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm7589-201ENSMUST00000085631 534 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.04■□□□□ -0
Col16a1Q8BLX7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col16a1Q8BLX7 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Gm1826-201ENSMUST00000118646 1162 ntBASIC15.03■□□□□ -0
Col16a1Q8BLX7 Gm14034-201ENSMUST00000120147 551 ntBASIC15.03■□□□□ -0
Col16a1Q8BLX7 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Gm25872-201ENSMUST00000177784 100 ntBASIC15.03■□□□□ -0
Col16a1Q8BLX7 Gm4753-201ENSMUST00000188327 1255 ntBASIC15.03■□□□□ -0
Col16a1Q8BLX7 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col16a1Q8BLX7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms