Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp6nlQ80XC3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm13022-201ENSMUST00000121181 285 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm9135-201ENSMUST00000182963 990 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm17889-201ENSMUST00000198410 598 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Gm16380-201ENSMUST00000077997 478 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp6nlQ80XC3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp6nlQ80XC3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp6nlQ80XC3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usp6nlQ80XC3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm13549-201ENSMUST00000118339 796 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm43163-201ENSMUST00000196571 442 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm18514-201ENSMUST00000218980 436 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp6nlQ80XC3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms