Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pif1Q80SX8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm45635-201ENSMUST00000211516 2134 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm11949-201ENSMUST00000117640 372 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm11451-201ENSMUST00000118946 630 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm22138-201ENSMUST00000158748 128 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm4034-201ENSMUST00000187674 480 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm37299-201ENSMUST00000193951 826 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm2553-201ENSMUST00000215986 605 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm37234-201ENSMUST00000193259 1441 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.91□□□□□ -0.66
Pif1Q80SX8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pif1Q80SX8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Cog3-203ENSMUST00000227473 4197 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Map1b-203ENSMUST00000223725 2669 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm8731-201ENSMUST00000118088 412 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm15610-201ENSMUST00000120584 195 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm1848-201ENSMUST00000120711 789 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms